I ran a bolt gun at my last Appleseed. Scored my highest rifleman score yet. Is it a magazine fed bolt? If it's like my 22-250 with an internal box mag then yes that will be a disadvantage. Single shot will also be a disadvantage. Only on the timed AQTs. You can still learn a bunch, but your AQT scores will not be as good.
I was thinking of my Remington 700 in .308. It only holds 4+1. Is it OK to use a scope or would I have to use irons. I've never used the irons on that gun.